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Matthieu Foll Scientist (Bioinformatics)
Genetic Cancer Susceptibility Group

Speciality: Computational Cancer Genomics
Year Degree Major Institution Country/Town
2007 PhD Population genetics University of Grenoble France / Grenoble
2004 M.Sc. Computational and Applied Mathematics Grenoble Institute of Technology France / Grenoble
Current Research Projects

Rare Cancers Genomics initiative (www.rarecancersgenomics.com)
Lynnette Fernandez-Cuesta, Matthieu Foll

lungNENomics project: Unveiling the molecular pathways underlying the development of lung neuroendocrine neoplasms
Lynnette Fernandez-Cuesta, Matthieu Foll, Nicolas Alcala, Aurelie Gabriel, Lise Mangiante, Alex Di Genova Bravo, Sylvie Lantuejoul, Nicolas Girard, Talya Dayton

MESOMICS project: Multi-omic characterization of malignant pleural mesothelioma
Lynnette Fernandez-Cuesta, Matthieu Foll, Lise Mangiante, Nicolas Alcala, Alexandra Sexton-Oates, Francoise Galateau-Salle, Nicolas Girard, Jean-Michel Maury

panNENomics project: Unveiling the molecular pathways underlying the development of neuroendocrine neoplasms
Lynnette Fernandez-Cuesta, Matthieu Foll, Sylvie Lantuejoul, Nicolas Girard, Thomas Walter, Valerie Hervieu

ORCID ID: https://orcid.org/0000-0001-9006-8436


Selected Publications

Tiffany M. Delhomme, Patrice H. Avogbe, Aurélie Gabriel, Nicolas Alcala, Noemie Leblay, Catherine Voegele, Maxime Vallée, Priscilia Chopard, Amélie Chabrier, Behnoush Abedi-Ardekani, Valérie Gaborieau, Ivana Holcatova, Vladimir Janout, Lenka Foretová, Sasa Milosavljevic, David Zaridze, Anush Mukeriya, Elisabeth Brambilla, Paul Brennan, Ghislaine Scelo, Lynnette Fernandez-Cuesta, Graham Byrnes, Florence Le Calvez-Kelm, James D. McKay, Matthieu Foll (2020). Needlestack: an ultra-sensitive variant caller for multi-sample next generation sequencing data. bioRxiv

Nicholson AG, Sauter JL, Nowak AK, Kindler HL, Gill RR, Remy-Jardin M, Armato SG, Fernandez-Cuesta L, Bueno R, Alcala N, Foll M, Pass H, Attanoos R, Baas P, Beasley MB, Brcic L, Butnor KJ, Chirieac LR, Churg A, Courtiol P, Dacic S, De Perrot M, Frauenfelder T, Gibbs A, Hirsch FR, Hiroshima K, Husain A, Klebe S, Lantuejoul S, Moreira A, Opitz I, Perol M, Roden A, Roggli V, Scherpereel A, Tirode F, Tazelaar H, Travis WD, Tsao MS, van Schil P, Vignaud JM, Weynand B, Cree I, Rusch VW, Girard N, Galateau-Salle F. (2020). EURACAN/IASLC proposals for updating the histologic classification of pleural mesothelioma: towards a more multidisciplinary approach. J Thorac Oncol

Fernandez-Cuesta L and Foll M (2019). Molecular studies of lung neuroendocrine neoplasms uncover new concepts and entities. Transl Lung Cancer Res

Alcala N, Mangiante L, Le-Stang N, Gustafon CE, Boyault S, Damiola F, Alcala K, Brevet M, Thivolet-Bejui F, Blanc-Fournier C, Le Rochais JP, Planchard G, Rousseau N, Damotte D, Pairon JC, Copin MC, Scherpereel A, Wasielewski E, Wicquart L, Lacomme S, Vignaud JM, Ancelin G, Girard C, Sagan C, Bonnetaud C, Hofman V, Hofman P, Mouroux J, Thomas de Montpreville V, Clermont-Taranchon E, Mazieres J, Rouquette I, Begueret H, Blay JY, Lantuejoul S, Bueno R, Caux C, Girard N, McKay JD, Foll M#, Galateau-Salle F#, Fernandez-Cuesta L# (2019). Redefining malignant pleural mesothelioma types as a continuum uncovers immune-vascular interactions. EBioMedicine

Alcala N, Leblay N, Gabriel AAG, Mangiante L, Hervas D, Giffon T, Sertier AS, Ferrari A, Derks J, Ghantous A, Delhomme TM, Chabrier A, Cuenin C, Abedi-Ardekani B, Boland A, Olaso R, Meyer V, Altmuller J, Le Calvez-Kelm F, Durand G, Voegele C, Boyault S, Moonen L, Lemaitre N, Lorimier P, Toffart AC, Soltermann A, Clement JH, Saenger J, Field JK, Brevet M, Blanc-Fournier C, Galateau-Salle F, Le Stang N, Russell PA, Wright G, Sozzi G, Pastorino U, Lacomme S, Vignaud JM, Hofman V, Hofman P, Brustugun OT, Lund-Iversen M, Thomas de Montpreville V, Muscarella LA, Graziano P, Popper H, Stojsic J, Deleuze JF, Herceg Z, Viari A, Nuernberg P, Pelosi G, Dingemans AMC, Milione M, Roz L, Brcic L, Volante M, Papotti MG, Caux C, Sandoval J, Hernandez-Vargas H, Brambilla E, Speel EJM, Girard N, Lantuejoul S, McKay JD, Foll M#, Fernandez-Cuesta L# (2019). Integrative and comparative genomic analyses identify clinically relevant pulmonary carcinoid groups and unveil the supra-carcinoids. Nat Commun

Scientific Societies Membership

European Neuroendocrine Tumor Society (ENETs)

French MESOBANK Scientific Committee

Mesothelioma Research Network (MRN)

International Association for the Study of Lung Cancer (IASLC)

Societé Française de Bioinformatique (SFBI)

Roles and Responsibilities

Coordination of bioinformatics at IARC

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Publication status

Published in section: WHO'S WHO

Publication date: 19 July, 2018, 11:28

Direct link: https://www.iarc.fr/staff_member/matthieu-foll/

© Copyright International Agency on Research for Cancer 2020